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Actual Window Guard

$29.95 - Actual Tools
Actual Window Guard is simple solution for optimizing your workspace. Use it to always keep all windows on the desktop in the order you like. It can automatically set windows’ position and size, minimize and maximize windows on startup, align them, close irrelevant pop-ups, keep windows on top and prevent them from accidental closing. The tool runs on all Windows platforms, works with x64 applications and manages command prompt windows as well.
window, desktop, windows, minimize, close, keyboard, hide window, minimize to tray, tray, transparent
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Actual Window Minimizer

$19.95 - Actual Tools
Actual Window Minimizer lets you minimize windows to the system tray or any desktop spot by various means. This includes the Minimize-to-Tray button in window's title bar, hotkey use and automatic minimization upon window startup or deactivation. Also you can set default (Minimize or Close) buttons to minimize a window to tray. All these features let you organize your workspace with ease. The tool supports all windows, even command prompt ones.
popup, x server, xserver, transparency, console, priority, hide, privacy, translucent, hotkeys
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TopDesk

$19.95 - Otaku Software
TopDesk radically reduces the time you spend switching between tasks by giving you the ability to quickly find the window you want from a thumbnail view. With a single key press you can instantly view thumbnails of all open windows or hide all windows to quickly access the desktop.
boss key, taskbar, xwinpro, x emulator, x window system, windows xserver, nfs server, motif, pc xserver, x windows server
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Plancoin

Free - Romain Vallet
Plancoin is a "boss key" program: it allows you to hide some selected windows in one keypress.
It lets you set up two hot keys: one to hide the windows and show them back, and one
to show the Plancoin Settings window. The windows that must be hidden are identified by a sentence in their title. The program then runs in the background and responds to the hot keys.
You can also choose to mute the sound when hiding windows.
pc x server, linux, lprm, nfs client, rexec, x server for windows, x winpro, fvwm, rlogin, x win pro
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Actual Window Menu

$19.95 - Actual Tools
Actual Window Menu is an innovative suite of the most popular and essential tools that enables users to operate windows on the desktop in some advanced ways: minimize them to tray, set up priority, apply transparency, roll up/unroll, resize, align, etc. Once installed, the application embeds its extra commands into each window's system menu. These new commands are easy to use and significantly enhance windows management abilities.
automatic, change, automate, maximize, icon, affinity, startup, command prompt, hide program, resize
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Switch Window

Free - Desktop Boosters Software
We all have faced a situation when we need to keep dozens of windows open -documents, e-mail client, several web browser windows - all mess up the Taskbar resulting in poor computing experience and frustration. SwitchWindow is a freeware tool that provides two important functions from virtually any spot you can right-click: it allows switching to the desired window using menu as well as closing unwanted windows with CTRL+Right Click combination!
management, transparent window, desktop utility, window managers, system wide, virtual desktop, hot keys, multi monitor, application, button
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